External Advisory Board Meeting
for NIH BTRR on
“MMBioS: High Performance Computing for
Multiscale Modeling of Biological Systems”
U of Pittsburgh, Carnegie Mellon U, Pittsburgh Supercomputing Center & Salk Institute
Meeting Place: Department of Computational and Systems Biology, School of Medicine, University of Pittsburgh, BST3, 3501 Fifth Avenue, Room 6014, Pittsburgh, PA 15213
Agenda
Thursday October 30 |
|
8:15am-8:45am |
Breakfast |
8:45am-10:15am |
TR&D3 + Associated DBPs/C&SPs |
8:45am-9:05am |
Bob Murphy, PhD TR&D3 Aim 1: Image-Derived Generative Spatiotemporal Models of Cell Organization |
9:05am-9:10am |
Bob Murphy, PhD C&SP7: Interfacing Image-Derived Generative Models with Cell Simulation Engines |
9:10am-9:15am |
Christoph Wuelfing, PhD DBP4: Itk as a Regulator of the Spatiotemporal Organization of T-cell Signaling |
9:15am-9:40am |
Art Wetzel, PhD TR&D3 Aim 2: High efficiency registration and analysis algorithms |
9:40am-9:45am |
Clay Reid, PhD DBP5: Functional Connectomics: Terascale Reconstructions of Cortical Circuits |
9:45am-9:50am |
Jeff Lichtman, PhD C&SP10: Advancing high-throughput thin-section scanning EM to study relationships between neuronal circuit structure and function |
9:50am-9:55am |
Art Wetzel, PhD TR&D3 Aim 3: Virtual Volume Filesystem |
9:55am-10:15am |
Discussion of TR&D3 and Associated DBPs and C&SPs |
10:15am-10:45am |
Coffee Break |
10:45am-12:15pm |
TR&D2 + Associated DBPs/C&SPs |
10:45am-11:15am |
Jim Faeder, PhD Overview of the Aims and Technical Progress |
11:15am-11:35am |
Mary Kennedy, PhD DBP2: Dynamics of CaMKII Activation in Dendritic Spines |
11:35am-11:55am |
Stephen D. Meriney, PhD C&SP8: Dynamics of Calcium Release in the NMJ |
11:55am-12:15pm |
Thomas Bartol, PhD Spatial Modeling of Cell Division |
12:15pm-1:15pm |
Lunch Break |
1:15pm-2:45pm |
TR&D1 + associated DBPs/C&SPs |
1:15pm-1:45pm |
Ivet Bahar, PhD Overview of the Aims and Progress |
1:45pm-1:55pm |
Gonzalo Torres, PhD DBP1: Insights into G-protein modulation of human dopamine transporter |
1:55pm-2:05pm |
Alexander D. Sorkin, PhD Endocytosis of dopamine transporter (DAT): Mechanisms and role in DAT function |
2:05pm-2:25pm |
Chris Langmead, PhD Probabilistic Graphical Model Based Analysis and Modeling of Ensembles of Conformers |
2:25pm-2:45pm |
Dan Zuckerman, PhD Wrestling with scales: New tools for molecular simulation and beyond |
2:45pm-3:05pm |
Training and Dissemination |
2:45pm-3:05pm |
Markus Dittrich, PhD Overview of Training and Dissemination Activities |
3:05pm-4:30pm |
Coffee Break |
3:05pm-4:30pm |
Discussion and Poster Session |